Single-Gene Studies

  1. Meysam Abbasi, Afsaneh Lavasanifar, and Hasan Uludag. Recent attempts at RNAi-mediated p-glycoprotein downregulation for reversal of multidrug resistance in cancer. Medicinal research reviews, 33(1):33–53, Jan 2013. (doi:10.1002/med.20244)
  2. Suaad Ahmed, Ashwini Maratha, Aisha Qasim Butt, Enda Shevlin, and Sinead M. Miggin. Trif-mediated tlr3 and tlr4 signaling is negatively regulated by adam15. Journal of immunology (Baltimore, Md. : 1950), 190(5):2217–2228, Mar 2013. (doi:10.4049/jimmunol.1201630)
  3. Mazin A. Al-Salihi, Lina Herhaus, Thomas Macartney, and Gopal P. Sapkota. Usp11 augments tgfβ signalling by deubiquitylating alk5. Open biology, 2(6):120063, Jun 2012. (doi:10.1098/rsob.120063)
  4. Minna-Liisa Ankö, Lucia Morales, Ian Henry, Andreas Beyer, and Karla M. Neugebauer. Global analysis reveals srp20- and srp75-specific mrnps in cycling and neural cells. Nature structural & molecular biology, 17(8):962–970, Aug 2010. (doi:10.1038/nsmb.1862)
  5. T. Arnandis, I. Ferrer-Vicens, E. R. García-Trevijano, V. J. Miralles, C. García, L. Torres, J. R. Viña, and R. Zaragozá. Calpains mediate epithelial-cell death during mammary gland involution: mitochondria and lysosomal destabilization. Cell death and differentiation, 19(9):1536–1548, Sep 2012. (doi:10.1038/cdd.2012.46)
  6. Chris Bakal and Norbert Perrimon. Realizing the promise of RNAi high throughput screening. Developmental cell, 18(4):506–507, Apr 2010. (doi:10.1016/j.devcel.2010.04.005)
  7. Magdalena Banach-Orlowska, Iwona Pilecka, Anna Torun, Beata Pyrzynska, and Marta Miaczynska. Functional characterization of the interactions between endosomal adaptor protein appl1 and the nurd co-repressor complex. The Biochemical journal, 423(3):389–400, Nov 2009. (doi:10.1042/BJ20090086)
  8. Nirmalya Basu, Sayanti Saha, Imran Khan, Subbaraya G. Ramachandra, and Sandhya S. Visweswariah. Intestinal cell proliferation and senescence are regulated by receptor guanylyl cyclase c and p21. The Journal of biological chemistry, 289(1):581–593, Jan 2014. (doi:10.1074/jbc.M113.511311)
  9. Alexandre Beaulieu, Émilie Gravel, Alexandre Cloutier, Isabelle Marois, Éloïc Colombo, Antoine Désilets, Catherine Verreault, Richard Leduc, Éric Marsault, and Martin V. Richter. Matriptase proteolytically activates influenza virus and promotes multicycle replication in the human airway epithelium. Journal of virology, 87(8):4237–4251, Apr 2013. (doi:10.1128/JVI.03005-12)
  10. Bhavneet Bhinder and Hakim Djaballah. Drug discovery and repurposing at memorial sloan kettering cancer center: chemical biology drives translational medicine. ACS chemical biology, 9(7):1394–1397, Jul 2014. (doi:10.1021/cb500479z)
  11. Kim Blakely, Troy Ketela, and Jason Moffat. Pooled lentiviral shRNA screening for functional genomics in mammalian cells. Methods in molecular biology (Clifton, N.J.), 781:161–182, 2011. (doi:10.1007/978-1-61779-276-2_9)
  12. James A. Blau and Michael T. McManus. Renewable RNAi. Nature biotechnology, 31(4):319–320, Apr 2013. (doi:10.1038/nbt.2547)
  13. Falk Butter, Lucy Davison, Tar Viturawong, Marion Scheibe, Michiel Vermeulen, John A. Todd, and Matthias Mann. Proteome-wide analysis of disease-associated snps that show allele-specific transcription factor binding. PLoS genetics, 8(9):e1002982, Sep 2012. (doi:10.1371/journal.pgen.1002982)
  14. Falk Butter, Dennis Kappei, Frank Buchholz, Michiel Vermeulen, and Matthias Mann. A domesticated transposon mediates the effects of a single-nucleotide polymorphism responsible for enhanced muscle growth. EMBO reports, 11(4):305–311, Apr 2010. (doi:10.1038/embor.2010.6)
  15. Benjamin R. Carone, Jui-Hung Hung, Sarah J. Hainer, Min-Te Chou, Dawn M. Carone, Zhiping Weng, Thomas G. Fazzio, and Oliver J. Rando. High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm. Developmental cell, 30(1):11–22, Jul 2014. (doi:10.1016/j.devcel.2014.05.024)
  16. Isabel Carrascoso, Carmen Sánchez-Jiménez, and José M. Izquierdo. Genome-wide profiling reveals a role for t-cell intracellular antigens tia1 and tiar in the control of translational specificity in hela cells. The Biochemical journal, 461(1):43–50, Jul 2014. (doi:10.1042/BJ20140227)
  17. Laura Carrassa, Rosaria Chilà, Monica Lupi, Francesca Ricci, Cinzia Celenza, Marco Mazzoletti, Massimo Broggini, and Giovanna Damia. Combined inhibition of chk1 and wee1: in vitro synergistic effect translates to tumor growth inhibition in vivo. Cell cycle (Georgetown, Tex.), 11(13):2507–2517, Jul 2012. (doi:10.4161/cc.20899)
  18. Debojyoti Chakraborty, Dennis Kappei, Mirko Theis, Anja Nitzsche, Li Ding, Maciej Paszkowski-Rogacz, Vineeth Surendranath, Nicolas Berger, Herbert Schulz, Kathrin Saar, Norbert Hubner, and Frank Buchholz. Combined RNAi and localization for functionally dissecting long noncoding RNAs. Nature methods, 9(4):360–362, Apr 2012. (doi:10.1038/nmeth.1894)
  19. B. Nelson Chau, Robert L. Diaz, Matthew A. Saunders, Chun Cheng, Aaron N. Chang, Paul Warrener, Jeffrey Bradshaw, Peter S. Linsley, and Michele A. Cleary. Identification of sulf2 as a novel transcriptional target of p53 by use of integrated genomic analyses. Cancer research, 69(4):1368–1374, Feb 2009. (doi:10.1158/0008-5472.CAN-08-2742))
  20. Kahlin Cheung-Ong, Guri Giaever, and Corey Nislow. Dna-damaging agents in cancer chemotherapy: serendipity and chemical biology. Chemistry & biology, 20(5):648–659, May 2013. (doi:10.1016/j.chembiol.2013.04.007)
  21. Christopher R. Chin and Abraham L. Brass. A genome wide rna interference screening method to identify host factors that modulate influenza a virus replication. Methods (San Diego, Calif.), 59(2):217–224, Feb 2013. (doi:10.1016/j.ymeth.2012.09.009)
  22. Xiao Chu, Wei Chen, Ning Li, Xiao-Zhu Hu, Chong-Tao Du, Shui-Xing Yu, Min Zhou, Xiao-Jing Zhang, Gui-Mei Jiang, Wen-Yu Han, Xu-Ming Deng, and Yong-Jun Yang. Cytosolic double-stranded dna induces nonnecroptotic programmed cell death in trophoblasts via ifi16. The Journal of infectious diseases, 210(9):1476–1486, Nov 2014. (doi:10.1093/infdis/jiu272)
  23. Claudio Collinet, Martin Stöter, Charles R. Bradshaw, Nikolay Samusik, Jochen C. Rink, Denise Kenski, Bianca Habermann, Frank Buchholz, Robert Henschel, Matthias S. Mueller, Wolfgang E. Nagel, Eugenio Fava, Yannis Kalaidzidis, and Marino Zerial. Systems survey of endocytosis by multiparametric image analysis. Nature, 464(7286):243–249, Mar 2010. (doi:10.1038/nature08779)
  24. Reinoud E. A. de Groot, Ranjani S. Ganji, Ondrej Bernatik, Bethan Lloyd-Lewis, Katja Seipel, Katerina Sedová, Zbynek Zdráhal, Vishnu M. Dhople, Trevor C. Dale, Hendrik C. Korswagen, and Vitezslav Bryja. Huwe1-mediated ubiquitylation of dishevelled defines a negative feedback loop in the wnt signaling pathway. Science signaling, 7(317):ra26, Mar 2014. (doi:10.1126/scisignal.2004985)
  25. Li Ding, Maciej Paszkowski-Rogacz, Anja Nitzsche, Mikolaj Michal Slabicki, Anne-Kristin Heninger, Ingrid de Vries, Ralf Kittler, Magno Junqueira, Andrej Shevchenko, Herbert Schulz, Norbert Hubner, Michael Xavier Doss, Agapios Sachinidis, Juergen Hescheler, Roberto Iacone, Konstantinos Anastassiadis, A. Francis Stewart, M. Teresa Pisabarro, Antonio Caldarelli, Ina Poser, Mirko Theis, and Frank Buchholz. A genome-scale RNAi screen for oct4 modulators defines a role of the paf1 complex for embryonic stem cell identity. Cell stem cell, 4(5):403–415, May 2009. (doi:10.1016/j.stem.2009.03.009)
  26. Karolin V. Dorn, Casey E. Hughes, and Rajat Rohatgi. A smoothened-evc2 complex transduces the hedgehog signal at primary cilia. Developmental cell, 23(4):823–835, Oct 2012. (doi:10.1016/j.devcel.2012.07.004)
  27. George Elvira, Bernard Massie, and Luc DesGroseillers. The zinc-finger protein zfr is critical for staufen 2 isoform specific nucleocytoplasmic shuttling in neurons. Journal of neurochemistry, 96(1):105–117, Jan 2006. (doi:10.1111/j.1471-4159.2005.03523.x)
  28. Holger Erfle and Rainer Pepperkok. Production of siRNA- and cDNA-transfected cell arrays on noncoated chambered coverglass for high-content screening microscopy in living cells. Methods in molecular biology (Clifton, N.J.), 360:155–161, 2007. (doi:10.1385/1-59745-165-7:155)
  29. Christina Falschlehner, Sandra Steinbrink, Gerrit Erdmann, and Michael Boutros. High-throughput RNAi screening to dissect cellular pathways: a how-to guide. Biotechnology journal, 5(4):368–376, Apr 2010. (doi:10.1002/biot.200900277)
  30. Ramzi Fattouh, Hyunwoo Kwon, Mark A. Czuczman, John W. Copeland, Laurence Pelletier, Margot E. Quinlan, Aleixo M. Muise, Darren E. Higgins, and John H. Brumell. The diaphanous-related formins promote protrusion formation and cell-to-cell spread of listeria monocytogenes. The Journal of infectious diseases, Oct 2014. (doi:10.1093/infdis/jiu546)
  31. Thomas G. Fazzio, Jason T. Huff, and Barbara Panning. An rnai screen of chromatin proteins identifies tip60-p400 as a regulator of embryonic stem cell identity. Cell, 134(1):162–174, Jul 2008. (doi:10.1016/j.cell.2008.05.031)
  32. Darío Fernández, Angélica Horrillo, Carolina Alquezar, Consuelo González-Manchón, Roberto Parrilla, and Matilde S. Ayuso. Control of cell adhesion and migration by podocalyxin. implication of rac1 and cdc42. Biochemical and biophysical research communications, 432(2):302–307, Mar 2013. (doi:10.1016/j.bbrc.2013.01.112)
  33. Francesca Finetti, Laura Patrussi, Giulia Masi, Anna Onnis, Donatella Galgano, Orso Maria Lucherini, Gregory J. Pazour, and Cosima T. Baldari. Specific recycling receptors are targeted to the immune synapse by the intraflagellar transport system. Journal of cell science, 127(Pt 9):1924–1937, May 2014. (doi:10.1242/jcs.139337)
  34. Jennifer L. Fish, Colette Dehay, Henry Kennedy, and Wieland B. Huttner. Making bigger brains-the evolution of neural-progenitor-cell division. Journal of cell science, 121(Pt 17):2783–2793, Sep 2008. (doi:10.1242/jcs.023465)
  35. Jennifer L. Fish, Yoichi Kosodo, Wolfgang Enard, Svante Pääbo, and Wieland B. Huttner. Aspm specifically maintains symmetric proliferative divisions of neuroepithelial cells. Proceedings of the National Academy of Sciences of the United States of America, 103(27):10438–10443, Jul 2006. (doi:10.1073/pnas.0604066103)
  36. Jimmy Fourtounis, I-Ming Wang, Marie-Claude Mathieu, David Claveau, Tenneille Loo, Aimee L. Jackson, Mette A. Peters, Alex G. Therien, Yves Boie, and Michael A. Crackower. Gene expression profiling following nrf2 and keap1 sirna knockdown in human lung fibroblasts identifies ccl11/eotaxin-1 as a novel nrf2 regulated gene. Respiratory research, 13:92, Oct 2012. (doi:10.1186/1465-9921-13-92)
  37. Ryoji Fujii, Changjun Zhu, Yunfei Wen, Hiroyuki Marusawa, Beatrice Bailly-Maitre, Shu-ichi Matsuzawa, Hong Zhang, Youngsoo Kim, C. Frank Bennett, Wei Jiang, and John C. Reed. Hbxip, cellular target of hepatitis b virus oncoprotein, is a regulator of centrosome dynamics and cytokinesis. Cancer research, 66(18):9099–9107, Sep 2006. (doi:10.1158/0008-5472.CAN-06-1886)
  38. Annica K. B. Gad, Vishal Nehru, Aino Ruusala, and Pontus Aspenström. Rhod regulates cytoskeletal dynamics via the actin nucleation-promoting factor wasp homologue associated with actin golgi membranes and microtubules. Molecular biology of the cell, 23(24):4807–4819, Dec 2012. (doi:10.1091/mbc.E12-07-0555)
  39. Sudarshan Gadadhar, Namrata Bora, Vinita Tiwari, and Anjali A. Karande. Sequestration of the abrin a chain to the nucleus by basp1 increases the resistance of cells to abrin toxicity. The Biochemical journal, 458(2):375–385, Mar 2014. (doi:10.1042/BJ20131110)
  40. Sourish Ghosh, Kallol Dutta, and Anirban Basu. Chandipura virus induces neuronal death through fas-mediated extrinsic apoptotic pathway. Journal of virology, 87(22):12398–12406, Nov 2013. (doi:10.1128/JVI.01864-13)
  41. Mireia Gimenez-Barcons, Bonaventura Clotet, and Miguel Angel Martinez. Endoribonuclease-prepared short interfering RNAs induce effective and specific inhibition of human immunodeficiency virus type 1 replication. Journal of virology, 81(19):10680–10686, Oct 2007. (doi:10.1128/JVI.00950-07)
  42. Maria Ana Gomez-Ferreria, Mikhail Bashkurov, Michael Mullin, Anne-Claude Gingras, and Laurence Pelletier. Cep192 interacts physically and functionally with the k63-deubiquitinase cyld to promote mitotic spindle assembly. Cell cycle (Georgetown, Tex.), 11(19):3555–3558, Oct 2012. (doi:10.4161/cc.21574)
  43. Anastas Gospodinov, Thomas Vaissiere, Dragomir B. Krastev, Gaëlle Legube, Boyka Anachkova, and Zdenko Herceg. Mammalian ino80 mediates double-strand break repair through its role in DNA end strand resection. Molecular and cellular biology, 31(23):4735–4745, Dec 2011. (doi:10.1128/MCB.06182-11)
  44. Boris Greber, Hans Lehrach, and James Adjaye. Silencing of core transcription factors in human EC cells highlights the importance of autocrine fgf signaling for self-renewal. BMC developmental biology, 7:46, May 2007. (doi:10.1186/1471-213X-7-46)
  45. Shucheng Gu, Youshan Zhao, Juan Guo, Feng Xu, Chengming Fei, Xi Zhang, Chao Xiao, Chunkang Chang, and Xiao Li. High expression of apaf-1 elevates erythroid apoptosis in iron overload myelodysplastic syndrome. Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 35(3):2211–2218, Mar 2014. (doi:10.1007/s13277-013-1294-x)
  46. Amanda J. Guise, Todd M. Greco, Irene Y. Zhang, Fang Yu, and Ileana M. Cristea. Aurora b-dependent regulation of class iia histone deacetylases by mitotic nuclear localization signal phosphorylation. Molecular & cellular proteomics : MCP, 11(11):1220–1229, Nov 2012. (doi:10.1074/mcp.M112.021030)
  47. Rajat Gupta, Prasad Kasturi, Andreas Bracher, Christian Loew, Min Zheng, Adriana Villella, Dan Garza, F. Ulrich Hartl, and Swasti Raychaudhuri. Firefly luciferase mutants as sensors of proteome stress. Nature methods, 8(10):879–884, Sep 2011. (doi:10.1038/nmeth.1697)
  48. Anne-Kristin Heninger and Frank Buchholz. Production of endoribonuclease-prepared short interfering RNAs (esiRNAs) for specific and effective gene silencing in mammalian cells. CSH protocols, 2007:pdb.prot4824, Aug 2007.
  49. Andreas Henschel, Frank Buchholz, and Bianca Habermann. Deqor: a web-based tool for the design and quality control of siRNAs. Nucleic acids research, 32(Web Server issue):W113–W120, Jul 2004. (doi:10.1093/nar/gkh408)
  50. Jürgen Hescheler, Agapios Sachinidis, Shuhua Chen, and Johannes Winkler. The fungenes consortium: functional genomics in engineered embryonic stem cells. Stem cell reviews, 2(1):1–4, 2006. (doi:10.1007/s12015-006-0001-3)
  51. Sebastian Hoepfner, Fedor Severin, Alicia Cabezas, Bianca Habermann, Anja Runge, David Gillooly, Harald Stenmark, and Marino Zerial. Modulation of receptor recycling and degradation by the endosomal kinesin kif16b. Cell, 121(3):437–450, May 2005. (doi:10.1016/j.cell.2005.02.017)
  52. Margret Hohberg, Judith Knöchel, Christian J. Hoffmann, Sven Chlench, Wulf Wunderlich, Alexander Alter, Julian Maroski, Bernd J. Vorderwülbecke, Luis Da Silva-Azevedo, Rose Knudsen, Robert Lehmann, Katarzyna Fiedorowicz, Mauro Bongrazio, Bianca Nitsche, Michael Hoepfner, Beata Styp-Rekowska, Axel R. Pries, and Andreas Zakrzewicz. Expression of adamts1 in endothelial cells is induced by shear stress and suppressed in sprouting capillaries. Journal of cellular physiology, 226(2):350–361, Feb 2011. (doi:10.1002/jcp.22340)
  53. Matthias Höllerhage, Joachim N. Goebel, Anderson de Andrade, Tobias Hildebrandt, Amalia Dolga, Carsten Culmsee, Wolfgang H. Oertel, Bastian Hengerer, and Günter U. Höglinger. Trifluoperazine rescues human dopaminergic cells from wild-type α-synuclein-induced toxicity. Neurobiology of aging, 35(7):1700–1711, Jul 2014. (doi:10.1016/j.neurobiolaging.2014.01.027)
  54. Jie Hong, Zhikang Qian, Shuiyuan Shen, Taishan Min, Chang Tan, JianFeng Xu, Yingchun Zhao, and Weida Huang. High doses of siRNAs induce eri-1 and adar-1 gene expression and reduce the efficiency of RNA interference in the mouse. The Biochemical journal, 390(Pt 3):675–679, Sep 2005. (doi:10.1042/BJ20050647)
  55. Kanji Hori, Akira Matsuda, Nobuyuki Ebihara, Kojiro Imai, Kazuhiko Mori, Toshinari Funaki, Yasuo Watanabe, Satoru Nakatani, Kiyotaka Okada, Osamu Matsuo, and Akira Murakami. Involvement of plasminogen activator inhibitor-1 in the pathogenesis of atopic cataracts. Investigative ophthalmology & visual science, 53(4):1846–1851, Apr 2012. (doi:10.1167/iovs.11-8380)
  56. Linfeng Huang and Judy Lieberman. Production of highly potent recombinant siRNAs in Escherichia coli. Nature protocols, 8(12):2325–2336, Dec 2013. (doi:10.1038/nprot.2013.149)
  57. Fen Huang, Xidao Wang, Eric M. Ostertag, Tulip Nuwal, Bo Huang, Yuh-Nung Jan, Allan I. Basbaum, and Lily Yeh Jan. Tmem16c facilitates na(+)-activated k+ currents in rat sensory neurons and regulates pain processing. Nature neuroscience, 16(9):1284–1290, Sep 2013. (doi:10.1038/nn.3468)
  58. Wendy C. Huang, Shaohua Xiao, Fen Huang, Brian D. Harfe, Yuh Nung Jan, and Lily Yeh Jan. Calcium-activated chloride channels (caccs) regulate action potential and synaptic response in hippocampal neurons. Neuron, 74(1):179–192, Apr 2012. (doi:10.1016/j.neuron.2012.01.033)
  59. Anna Hupalowska, Beata Pyrzynska, and Marta Miaczynska. Appl1 regulates basal nf-κb activity by stabilizing nik. Journal of cell science, 125(Pt 17):4090–4102, Sep 2012. (doi:10.1242/jcs.105171)
  60. Kellie A. Jacks and C. Anne Koch. Differential regulation of mitogen- and stress-activated protein kinase-1 and -2 (msk1 and msk2) by ck2 following UV radiation. The Journal of biological chemistry, 285(3):1661–1670, Jan 2010. (doi:10.1074/jbc.M109.083808)
  61. Lis Jakobsen, Katja Vanselow, Marie Skogs, Yusuke Toyoda, Emma Lundberg, Ina Poser, Lasse G. Falkenby, Martin Bennetzen, Jens Westendorf, Erich A. Nigg, Mathias Uhlen, Anthony A. Hyman, and Jens S. Andersen. Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods. The EMBO journal, 30(8):1520–1535, Apr 2011. (doi:10.1038/emboj.2011.63)
  62. Qingfei Jiang, Leslie A. Crews, Christian L. Barrett, Hye-Jung Chun, Angela C. Court, Jane M. Isquith, Maria A. Zipeto, Daniel J. Goff, Mark Minden, Anil Sadarangani, Jessica M. Rusert, Kim-Hien T. Dao, Sheldon R. Morris, Lawrence S. B. Goldstein, Marco A. Marra, Kelly A. Frazer, and Catriona H. M. Jamieson. Adar1 promotes malignant progenitor reprogramming in chronic myeloid leukemia. Proceedings of the National Academy of Sciences of the United States of America, 110(3):1041–1046, Jan 2013. (doi:10.1073/pnas.1213021110)
  63. Xiang Jiao, Sean D. Hooper, Tatjana Djureinovic, Chatarina Larsson, Fredrik Wärnberg, Christian Tellgren-Roth, Johan Botling, and Tobias Sjöblom. Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing. BMC genomics, 14:165, Mar 2013. (doi:10.1186/1471-2164-14-165)
  64. Manel Joaquin, Albert Gubern, Daniel González-Nuñez, E. Josué Ruiz, Isabel Ferreiro, Eulalia de Nadal, Angel R. Nebreda, and Francesc Posas. The p57 cdki integrates stress signals into cell-cycle progression to promote cell survival upon stress. The EMBO journal, 31(13):2952–2964, Jun 2012. (doi:10.1038/emboj.2012.122)
  65. Greg Kabachinski, Masaki Yamaga, D. Michelle Kielar-Grevstad, Stephen Bruinsma, and Thomas F. J. Martin. Caps and munc13 utilize distinct pip2-linked mechanisms to promote vesicle exocytosis. Molecular biology of the cell, 25(4):508–521, Feb 2014. (doi:10.1091/mbc.E12-11-0829)
  66. Naoto Kakinuma, Badal Chandra Roy, Yun Zhu, Yong Wang, and Ryoiti Kiyama. Kank regulates rhoa-dependent formation of actin stress fibers and cell migration via 14-3-3 in pi3k-akt signaling. The Journal of cell biology, 181(3):537–549, May 2008. (doi:10.1083/jcb.200707022)
  67. Tatsuo Kanda, Bo Zhang, Yuri Kusov, Osamu Yokosuka, and Verena Gauss-Müller. Suppression of hepatitis a virus genome translation and replication by siRNAs targeting the internal ribosomal entry site. Biochemical and biophysical research communications, 330(4):1217–1223, May 2005. (doi:10.1016/j.bbrc.2005.03.105)
  68. Hara Kang, Justin Louie, Alexandra Weisman, Jessica Sheu-Gruttadauria, Brandi N. Davis-Dusenbery, Giorgio Lagna, and Akiko Hata. Inhibition of microRNA-302 (mir-302) by bone morphogenetic protein 4 (bmp4) facilitates the bmp signaling pathway. The Journal of biological chemistry, 287(46):38656–38664, Nov 2012. (doi:10.1074/jbc.M112.390898)
  69. Natalia A. Kaniuk, Veronica Canadien, Richard D. Bagshaw, Malina Bakowski, Virginie Braun, Marija Landekic, Shuvadeep Mitra, Ju Huang, Won Do Heo, Tobias Meyer, Laurence Pelletier, Helene Andrews-Polymenis, Michael McClelland, Tony Pawson, Sergio Grinstein, and John H. Brumell. Salmonella exploits arl8b-directed kinesin activity to promote endosome tubulation and cell-to-cell transfer. Cellular microbiology, 13(11):1812–1823, Nov 2011. (doi:10.1111/j.1462-5822.2011.01663.x)
  70. Dennis Kappei, Falk Butter, Christian Benda, Marion Scheibe, Irena Draskovic, Michelle Stevense, Clara Lopes Novo, Claire Basquin, Masatake Araki, Kimi Araki, Dragomir Blazhev Krastev, Ralf Kittler, Rolf Jessberger, J. Arturo Londoño-Vallejo, Matthias Mann, and Frank Buchholz. Hot1 is a mammalian direct telomere repeat-binding protein contributing to telomerase recruitment. The EMBO journal, 32(12):1681–1701, Jun 2013. (doi:10.1038/emboj.2013.105)
  71. Michelle J. Kean, Derek F. Ceccarelli, Marilyn Goudreault, Mario Sanches, Stephen Tate, Brett Larsen, Lucien C. D. Gibson, W. Brent Derry, Ian C. Scott, Laurence Pelletier, George S. Baillie, Frank Sicheri, and Anne-Claude Gingras. Structure-function analysis of core stripak proteins: a signaling complex implicated in Golgi polarization. The Journal of biological chemistry, 286(28):25065–25075, Jul 2011. (doi:10.1074/jbc.M110.214486)
  72. Satish Khurana, Alessia Melacarne, Rana Yadak, Sarah Schouteden, Tineke Notelaers, Mariaelena Pistoni, Christa Maes, and Catherine M. Verfaillie. Smad signaling regulates cxcl12 expression in the bone marrow niche, affecting homing and mobilization of hematopoietic progenitors. Stem cells (Dayton, Ohio), 32(11):3012–3022, Nov 2014. (doi:10.1002/stem.1794)
  73. Mikhail V. Kibanov, Ksenia S. Egorova, Sergei S. Ryazansky, Olesia A. Sokolova, Alexei A. Kotov, Oxana M. Olenkina, Anastasia D. Stolyarenko, Vladimir A. Gvozdev, and Ludmila V. Olenina. A novel organelle, the ping-body, in the nuage of Drosophila male germ cells is associated with piRNA-mediated gene silencing. Molecular biology of the cell, 22(18):3410–3419, Sep 2011. (doi:10.1091/mbc.E11-02-0168)
  74. Sangsung Kim, Changjoong Kang, Chan Young Shin, Sun Wook Hwang, Young Duk Yang, Won Sik Shim, Min-Young Park, Eunhee Kim, Misook Kim, Byung-Moon Kim, Hawon Cho, Youngki Shin, and Uhtaek Oh. Trpv1 recapitulates native capsaicin receptor in sensory neurons in association with fas-associated factor 1. The Journal of neuroscience : the official journal of the Society for Neuroscience, 26(9):2403–2412, Mar 2006. (doi:10.1523/JNEUROSCI.4691-05.2006)
  75. Caroline S. Kinter, Jillian M. Lundie, Halee Patel, Paul M. Rindler, Luke I. Szweda, and Michael Kinter. A quantitative proteomic profile of the nrf2-mediated antioxidant response of macrophages to oxidized ldl determined by multiplexed selected reaction monitoring. PloS one, 7(11):e50016, Nov 2012. (doi:10.1371/journal.pone.0050016)
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  77. Ralf Kittler, Laurence Pelletier, and Frank Buchholz. Systems biology of mammalian cell division. Cell cycle (Georgetown, Tex.), 7(14):2123–2128, Jul 2008.
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